Linux64 Build

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Linux64 Build

pjduplooy
Hi guys

I do not know if the dev list is the right place to ask, but I have been experiencing problems with building Opticks on Linux64.

I get a lot of errors with regards to minizip while building InterActiveApplication.

I have pasted the relevant things in here, and attached it is well in the hope that anyone can help me.

Regards

Pieter

Relevant "code"

g++ -o /home/pieter/Temp/opticks/Code/Build/linux-x86_64-release/Framework/InteractiveApplication.o -c -I/etc/java-config-2/current-system-vm/include -I/etc/java-config-2/current-system-vm/include/linux -I/home/pieter/Temp/opticks/Dependencies/64/include/qwt-qt4 -I/home/pieter/Temp/opticks/Dependencies/64/include/qt4/QtCore -I/home/pieter/Temp/opticks/Dependencies/64/include/qt4/QtGui -I/home/pieter/Temp/opticks/Dependencies/64/include/ehs -I/home/pieter/Temp/opticks/Dependencies/64/include/minizip -I/home/pieter/Temp/opticks/Dependencies/64/include/yaml-cpp -pthread -I/home/pieter/Temp/opticks/Dependencies/64/include/qt4 -I/home/pieter/Temp/opticks/Dependencies/64/include/qt4/Qt -I/home/pieter/Temp/opticks/Dependencies/64/include -m64 -fpic -Wall -Wno-unused-value -Wno-comment -O3 -DAPPLICATION_XERCES -DQT_CORE_LIB -DQT_GUI_LIB -DQT3_SUPPORT -DAPPLICATION_XERCES -IHdfPlugInLib -INitfPlugInLib -IPlugInLib -IPlugInUtilities -IWizard -IDesktop -IFramework -IGui -IInstaller -IModel -IPlugInManager -IUtilities -ISimpleApiLib -IInterfaces -IPlugInUtilities/pthreads-wrapper -IPlugInUtilities/Interfaces -IDesktop/Layer -IDesktop/Animation -IDesktop/Plot -IGui/GLView -IGui/Graphic -IGui/Undo -IGui/Image -IGui/Image Framework/InteractiveApplication.cpp
In file included from /home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:55:0,
                 from Installer/ZipResource.h:17,
                 from Installer/AebIo.h:14,
                 from Framework/InteractiveApplication.cpp:19:
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:127:51: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:128:51: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:129:51: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:130:51: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:131:51: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:133:51: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:134:51: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:140:5: error: ‘open_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:141:5: error: ‘read_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:142:5: error: ‘write_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:143:5: error: ‘tell_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:144:5: error: ‘seek_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:145:5: error: ‘close_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:146:5: error: ‘testerror_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:150:51: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:151:51: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:152:51: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:156:5: error: ‘open64_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:157:5: error: ‘read_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:158:5: error: ‘write_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:159:5: error: ‘tell64_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:160:5: error: ‘seek64_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:161:5: error: ‘close_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:162:5: error: ‘testerror_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:166:28: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:167:26: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:173:5: error: ‘open_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:174:5: error: ‘tell_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:175:5: error: ‘seek_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:186:21: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:187:22: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:188:23: error: expected initializer before ‘OF’
In file included from Installer/ZipResource.h:17:0,
                 from Installer/AebIo.h:14,
                 from Framework/InteractiveApplication.cpp:19:
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:153:45: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:166:32: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:167:34: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:184:33: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:191:36: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:198:29: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:205:37: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:208:39: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:216:40: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:229:37: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:235:36: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:242:34: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:288:44: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:297:42: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:321:55: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:331:39: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:337:47: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:345:40: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:358:40: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:373:40: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:379:39: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:393:32: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:395:35: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:400:27: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:405:42: error: expected initializer before ‘OF’
In file included from Installer/AebIo.h:14:0,
                 from Framework/InteractiveApplication.cpp:19:
Installer/ZipResource.h: In member function ‘void** ZipFileObject::obtainResource(const ZipFileObject::Args&) const’:
Installer/ZipResource.h:73:48: error: ‘unzOpen’ was not declared in this scope
Installer/ZipResource.h: In member function ‘void ZipFileObject::releaseResource(const ZipFileObject::Args&, void**) const’:
Installer/ZipResource.h:91:27: error: ‘unzClose’ was not declared in this scope
scons: *** [/home/pieter/Temp/opticks/Code/Build/linux-x86_64-release/Framework/InteractiveApplication.o] Error 1
scons: building terminated because of errors.
--------------------------
Traceback (most recent call last):
  File "./build.py", line 758, in main
    options.concurrency)
  File "./build.py", line 289, in build_executable
    self.compile_code(buildenv, False, build_opticks, concurrency)
  File "./build.py", line 544, in compile_code
    self.build_debug_mode, concurrency, env, clean, ["core"])
  File "./build.py", line 261, in run_scons
    raise ScriptException("Scons did not compile project")
ScriptException: Scons did not compile project
--------------------------
Return code is 2000


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Re: Linux64 Build

dadkins
Administrator

This sounds like the problem described here: http://www.sbml.org/Forums/index.php?t=msg&th=2052&rid=0

 

What distro are you using? [We currently only have built dependencies available for Ubuntu 12 LTS (64-bit).]

 

-Dustan

 

 

 

From: Pieter du Plooy [mailto:[hidden email]]
Sent: Wednesday, November 07, 2012 6:50 AM
To: [hidden email]
Subject: [Opticks-devs] Linux64 Build

 

Hi guys

I do not know if the dev list is the right place to ask, but I have been experiencing problems with building Opticks on Linux64.

I get a lot of errors with regards to minizip while building InterActiveApplication.

I have pasted the relevant things in here, and attached it is well in the hope that anyone can help me.

Regards

Pieter

Relevant "code"

g++ -o /home/pieter/Temp/opticks/Code/Build/linux-x86_64-release/Framework/InteractiveApplication.o -c -I/etc/java-config-2/current-system-vm/include -I/etc/java-config-2/current-system-vm/include/linux -I/home/pieter/Temp/opticks/Dependencies/64/include/qwt-qt4 -I/home/pieter/Temp/opticks/Dependencies/64/include/qt4/QtCore -I/home/pieter/Temp/opticks/Dependencies/64/include/qt4/QtGui -I/home/pieter/Temp/opticks/Dependencies/64/include/ehs -I/home/pieter/Temp/opticks/Dependencies/64/include/minizip -I/home/pieter/Temp/opticks/Dependencies/64/include/yaml-cpp -pthread -I/home/pieter/Temp/opticks/Dependencies/64/include/qt4 -I/home/pieter/Temp/opticks/Dependencies/64/include/qt4/Qt -I/home/pieter/Temp/opticks/Dependencies/64/include -m64 -fpic -Wall -Wno-unused-value -Wno-comment -O3 -DAPPLICATION_XERCES -DQT_CORE_LIB -DQT_GUI_LIB -DQT3_SUPPORT -DAPPLICATION_XERCES -IHdfPlugInLib -INitfPlugInLib -IPlugInLib -IPlugInUtilities -IWizard -IDesktop -IFramework -IGui -IInstaller -IModel -IPlugInManager -IUtilities -ISimpleApiLib -IInterfaces -IPlugInUtilities/pthreads-wrapper -IPlugInUtilities/Interfaces -IDesktop/Layer -IDesktop/Animation -IDesktop/Plot -IGui/GLView -IGui/Graphic -IGui/Undo -IGui/Image -IGui/Image Framework/InteractiveApplication.cpp
In file included from /home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:55:0,
                 from Installer/ZipResource.h:17,
                 from Installer/AebIo.h:14,
                 from Framework/InteractiveApplication.cpp:19:
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:127:51: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:128:51: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:129:51: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:130:51: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:131:51: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:133:51: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:134:51: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:140:5: error: ‘open_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:141:5: error: ‘read_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:142:5: error: ‘write_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:143:5: error: ‘tell_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:144:5: error: ‘seek_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:145:5: error: ‘close_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:146:5: error: ‘testerror_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:150:51: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:151:51: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:152:51: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:156:5: error: ‘open64_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:157:5: error: ‘read_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:158:5: error: ‘write_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:159:5: error: ‘tell64_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:160:5: error: ‘seek64_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:161:5: error: ‘close_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:162:5: error: ‘testerror_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:166:28: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:167:26: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:173:5: error: ‘open_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:174:5: error: ‘tell_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:175:5: error: ‘seek_file_func’ does not name a type
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:186:21: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:187:22: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/ioapi.h:188:23: error: expected initializer before ‘OF’
In file included from Installer/ZipResource.h:17:0,
                 from Installer/AebIo.h:14,
                 from Framework/InteractiveApplication.cpp:19:
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:153:45: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:166:32: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:167:34: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:184:33: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:191:36: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:198:29: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:205:37: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:208:39: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:216:40: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:229:37: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:235:36: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:242:34: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:288:44: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:297:42: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:321:55: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:331:39: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:337:47: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:345:40: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:358:40: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:373:40: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:379:39: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:393:32: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:395:35: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:400:27: error: expected initializer before ‘OF’
/home/pieter/Temp/opticks/Dependencies/64/include/minizip/unzip.h:405:42: error: expected initializer before ‘OF’
In file included from Installer/AebIo.h:14:0,
                 from Framework/InteractiveApplication.cpp:19:
Installer/ZipResource.h: In member function ‘void** ZipFileObject::obtainResource(const ZipFileObject::Args&) const’:
Installer/ZipResource.h:73:48: error: ‘unzOpen’ was not declared in this scope
Installer/ZipResource.h: In member function ‘void ZipFileObject::releaseResource(const ZipFileObject::Args&, void**) const’:
Installer/ZipResource.h:91:27: error: ‘unzClose’ was not declared in this scope
scons: *** [/home/pieter/Temp/opticks/Code/Build/linux-x86_64-release/Framework/InteractiveApplication.o] Error 1
scons: building terminated because of errors.
--------------------------
Traceback (most recent call last):
  File "./build.py", line 758, in main
    options.concurrency)
  File "./build.py", line 289, in build_executable
    self.compile_code(buildenv, False, build_opticks, concurrency)
  File "./build.py", line 544, in compile_code
    self.build_debug_mode, concurrency, env, clean, ["core"])
  File "./build.py", line 261, in run_scons
    raise ScriptException("Scons did not compile project")
ScriptException: Scons did not compile project
--------------------------
Return code is 2000


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Re: Linux64 Build

pjduplooy
Dustan

I have built with a newer version of minizip (zlib). Copied the files over to the dependencies and it worked.

Use Gentoo. Thanks anyway prob sorted
Sent from my BlackBerry® wireless device

-----Original Message-----
From: "Adkins, Dustan" <[hidden email]>
Date: Wed, 7 Nov 2012 08:29:15
To: <[hidden email]>
Reply-To: [hidden email]
Subject: Re: [Opticks-devs] Linux64 Build

------------------------------------------------------------------------------
LogMeIn Central: Instant, anywhere, Remote PC access and management.
Stay in control, update software, and manage PCs from one command center
Diagnose problems and improve visibility into emerging IT issues
Automate, monitor and manage. Do more in less time with Central
http://p.sf.net/sfu/logmein12331_d2d
------------------------------------------------------------------------------
LogMeIn Central: Instant, anywhere, Remote PC access and management.
Stay in control, update software, and manage PCs from one command center
Diagnose problems and improve visibility into emerging IT issues
Automate, monitor and manage. Do more in less time with Central
http://p.sf.net/sfu/logmein12331_d2d
_______________________________________________
Opticks-devs mailing list
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https://lists.sourceforge.net/lists/listinfo/opticks-devs